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Aliases : REM39, VRN1
Description : regulatory protein *(VRN1) of PRC1 complex. REM-type transcription factor
Gene families : OG0001438 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001438_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra022376 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_157 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003712 | transcription coregulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003714 | transcription corepressor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004057 | arginyl-tRNA--protein transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004788 | thiamine diphosphokinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006766 | vitamin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009229 | thiamine diphosphate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016197 | endosomal transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016482 | cytosolic transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016598 | protein arginylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030975 | thiamine binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0032993 | protein-DNA complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042357 | thiamine diphosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043178 | alcohol binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| No external refs found! |