Aliases : ATL78, AtATL78
Description : RING-H2-class ATL-subclass E3 ubiquitin ligase. regulatory ubiquitin-protein ligase *(PRU2)
Gene families : OG0004026 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004026_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra022355 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_135 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003674 | molecular_function | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0005524 | ATP binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006006 | glucose metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006457 | protein folding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006914 | autophagy | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0008150 | biological_process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0017076 | purine nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0019318 | hexose metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0032553 | ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0036094 | small molecule binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0044183 | protein folding chaperone | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0044248 | cellular catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0050661 | NADP binding | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0097159 | organic cyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0140657 | ATP-dependent activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:1901363 | heterocyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:1902911 | protein kinase complex | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:1990234 | transferase complex | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | Brassica rapa GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 128 | 171 |
No external refs found! |