Bra022316 (DTF2, SHH2)


Aliases : DTF2, SHH2

Description : SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex. RNA polymerase-IV-positioning factor *(SHH)


Gene families : OG0010595 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra022316
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_3


Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004134 4-alpha-glucanotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004668 protein-arginine deiminase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006595 polyamine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006596 polyamine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009309 amine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009445 putrescine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009446 putrescine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042401 biogenic amine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:2001070 starch binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032001 SAWADEE_dom 126 253
No external refs found!