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  5. Bra022272

Bra022272 (HAL3, ATHAL3A, HAL3A, ATHAL3)


Aliases : HAL3, ATHAL3A, HAL3A, ATHAL3

Description : phosphopantothenoylcysteine decarboxylase. EC_4.1 carbon-carbon lyase


Gene families : OG0001934 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001934_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra022272
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_135


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003382 Flavoprotein 21 193
No external refs found!