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  5. Bra022149

Bra022149


Description : Trihelix-type transcription factor


Gene families : OG0011831 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra022149
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_196


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000152 nuclear ubiquitin ligase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000786 nucleosome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004788 thiamine diphosphokinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005680 anaphase-promoting complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015936 coenzyme A metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016778 diphosphotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030975 thiamine binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042357 thiamine diphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042723 thiamine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043178 alcohol binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097602 cullin family protein binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 285 370
No external refs found!