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  5. Bra021907

Bra021907


Description : not classified


Gene families : OG0010884 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra021907
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_256


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000152 nuclear ubiquitin ligase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005680 anaphase-promoting complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 192 238
IPR002885 Pentatricopeptide_rpt 89 137
IPR002885 Pentatricopeptide_rpt 393 438
IPR002885 Pentatricopeptide_rpt 293 339
IPR046848 E_motif 511 571
IPR002885 Pentatricopeptide_rpt 368 392
IPR002885 Pentatricopeptide_rpt 465 488
IPR002885 Pentatricopeptide_rpt 269 292
No external refs found!