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  5. Bra021817

Bra021817 (ZFN2)


Aliases : ZFN2

Description : regulatory protein of RNA homeostasis


Gene families : OG0005981 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra021817
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_278


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 227 251
IPR000571 Znf_CCCH 274 297
IPR000571 Znf_CCCH 90 114
IPR000571 Znf_CCCH 134 159
IPR000571 Znf_CCCH 45 69
No external refs found!