Bra021804 (ATVAMP725, VAMP725)


Aliases : ATVAMP725, VAMP725

Description : R-type component *(VAMP721/VAMP722) of SNARE cell-plate vesicle fusion complex. R-type VAMP7-group component of SNARE longin membrane fusion complex


Gene families : OG0000371 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra021804
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_171


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006084 acetyl-CoA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006163 purine nucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006637 acyl-CoA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009259 ribonucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009452 7-methylguanosine RNA capping IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019693 ribose phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032259 methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035383 thioester metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045338 farnesyl diphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072521 purine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902767 isoprenoid biosynthetic process via mevalonate IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR010908 Longin_dom 32 111
IPR042855 V_SNARE_CC 129 214
No external refs found!