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  5. Bra021590

Bra021590


Description : not classified


Gene families : OG0002217 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002217_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra021590
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_186


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003883 CTP synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004568 chitinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004827 proline-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006026 aminoglycan catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006433 prolyl-tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008061 chitin binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030151 molybdenum ion binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042255 ribosome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042256 cytosolic ribosome assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901071 glucosamine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901135 carbohydrate derivative metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 221 336
No external refs found!