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  5. Bra021560

Bra021560 (TPS25)


Aliases : TPS25

Description : mono-/sesquiterpene-/diterpene synthase. EC_4.2 carbon-oxygen lyase


Gene families : OG0002205 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra021560
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_66


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 280 544
IPR001906 Terpene_synth_N 74 249
No external refs found!