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  5. Bra021365

Bra021365 (EXPA13, ATHEXP ALPHA...)


Aliases : EXPA13, ATHEXP ALPHA 1.22, EXP13, ATEXPA13, ATEXP13

Description : alpha-class expansin


Gene families : OG0011676 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra021365
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_124


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004478 methionine adenosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0045273 respiratory chain complex II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046500 S-adenosylmethionine metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098803 respiratory chain complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 175 252
IPR009009 RlpA-like_DPBB 79 164
No external refs found!