Bra002125 (SAUR21)

Aliases : SAUR21

Description : not classified

Gene families : OG0000093 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra002125
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_221

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bra023656	SAUR21	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0050896	response to stimulus	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004180	carboxypeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005507	copper ion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006281	DNA repair	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006284	base-excision repair	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006820	monoatomic anion transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006974	DNA damage response	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008238	exopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019104	DNA N-glycosylase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0070008	serine-type exopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003676	SAUR_fam	18	95

External Links

No external refs found!