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Bra020912 (TUB9)


Aliases : TUB9

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer


Gene families : OG0000145 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra020912
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Bra008903 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004568 chitinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006026 aminoglycan catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046500 S-adenosylmethionine metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901071 glucosamine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 211
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
No external refs found!