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  5. Bra020758

Bra020758


Description : E3 ubiquitin ligase


Gene families : OG0004223 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra020758
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_227


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004190 aspartic-type endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0036452 ESCRT complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071985 multivesicular body sorting pathway IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 233 279
No external refs found!