1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra020672

Bra020672


Description : EC_4.2 carbon-oxygen lyase. pectate lyase


Gene families : OG0001982 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra020672
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_215


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005092 GDP-dissociation inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007265 Ras protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007266 Rho protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019104 DNA N-glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002022 Pec_lyase 151 332
No external refs found!