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Aliases : RHA3A, ATL44
Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG0003030 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra002061 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_55 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009507 | chloroplast | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009536 | plastid | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016744 | transketolase or transaldolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019321 | pentose metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019566 | arabinose metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046373 | L-arabinose metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0110102 | ribulose bisphosphate carboxylase complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 103 | 146 |
| No external refs found! |