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  5. Bra020646

Bra020646 (ATBXL1, BXL1)


Aliases : ATBXL1, BXL1

Description : polysaccharide O-acetyltransferase *(TBR). bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(BXL). EC_3.2 glycosylase


Gene families : OG0000915 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra020646
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Bra036143 ATBXL1, BXL1 EC_3.2 glycosylase. bifunctional... 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_6_19060.1 ATBXL1, BXL1 EC_3.2 glycosylase. bifunctional... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.04194 ATBXL1, BXL1 bifunctional alpha-L-arabinofuranosidase and... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004806 triglyceride lipase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0120227 acyl-CoA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 115 355
IPR002772 Glyco_hydro_3_C 400 628
IPR026891 Fn3-like 691 761
IPR025846 TBL_N 867 918
IPR026057 TBL_C 920 1207
No external refs found!