- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : OBO2, LSH1
Description : plant-specific ALOG-type transcription factor
Gene families : OG0002050 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra020610 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_168 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003876 | AMP deaminase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004497 | monooxygenase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005506 | iron ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006188 | IMP biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006801 | superoxide metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009060 | aerobic respiration | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019239 | deaminase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019646 | aerobic electron transport chain | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0020037 | heme binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022900 | electron transport chain | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022904 | respiratory electron transport chain | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032261 | purine nucleotide salvage | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032264 | IMP salvage | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043094 | cellular metabolic compound salvage | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043101 | purine-containing compound salvage | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043173 | nucleotide salvage | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0045275 | respiratory chain complex III | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045333 | cellular respiration | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046040 | IMP metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0047623 | adenosine-phosphate deaminase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0050789 | regulation of biological process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0050794 | regulation of cellular process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0065007 | biological regulation | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0070069 | cytochrome complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0098803 | respiratory chain complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0106380 | purine ribonucleotide salvage | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1990351 | transporter complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006936 | ALOG_dom | 16 | 138 |
| No external refs found! |