Bra020111

Description : core component *(RBX1) of CULLIN-based E3 ubiquitin ligase complexes

Gene families : OG0004477 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004477_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra020111
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_140

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_1_38380.1	No alias	core component *(RBX1) of CULLIN-based E3 ubiquitin...	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR024766	Znf_RING_H2	51	109

External Links

No external refs found!