Aliases : AtRAV1, RAV1, EDF4
Description : RAV/NGATHA-type transcription factor. AP2-RAV-type transcription factor *(EDF)
Gene families : OG0001166 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001166_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra019821 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bra011002 | EDF1, AtTEM1, TEM1 | AP2-RAV-type transcription factor *(EDF).... | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0005543 | phospholipid binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006810 | transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006887 | exocytosis | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008289 | lipid binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0010181 | FMN binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016192 | vesicle-mediated transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0032940 | secretion by cell | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0046903 | secretion | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0051179 | localization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0051234 | establishment of localization | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0099023 | vesicle tethering complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0140352 | export from cell | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
No external refs found! |