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  5. Bra019567

Bra019567 (SPT1, ATSPT1)


Aliases : SPT1, ATSPT1

Description : EC_2.3 acyltransferase. catalytic component *(LCB2) of serine C-palmitoyltransferase complex


Gene families : OG0004703 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004703_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra019567
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_135


Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0052646 alditol phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 39 361
No external refs found!