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  5. Bra018605

Bra018605 (XIC, ATXIC)


Aliases : XIC, ATXIC

Description : substrate adaptor *(SKIP24) of SCF E3 ubiquitin ligase complex. class XI myosin microfilament-based motor protein


Gene families : OG0002139 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra018605
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_16


Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005956 protein kinase CK2 complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006635 fatty acid beta-oxidation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009062 fatty acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019395 fatty acid oxidation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030258 lipid modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034440 lipid oxidation IEP Brassica rapa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044242 cellular lipid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072329 monocarboxylic acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002710 Dilute_dom 1584 1687
IPR004009 Myosin_N 237 277
IPR000048 IQ_motif_EF-hand-BS 1070 1087
IPR001609 Myosin_head_motor_dom 290 946
No external refs found!