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  5. Bra018595

Bra018595 (H2AXA, G-H2AX,...)


Aliases : H2AXA, G-H2AX, GAMMA-H2AX, HTA5

Description : histone *(H2A)


Gene families : OG0001486 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra018595
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Bra030460 HTA10 histone *(H2A) 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004857 enzyme inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006275 regulation of DNA replication IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006298 mismatch repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030983 mismatched DNA binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140678 molecular function inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 99 132
IPR007125 Histone_H2A/H2B/H3 16 96
No external refs found!