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  5. Bra018550

Bra018550 (SR34b, At-SR34b)


Aliases : SR34b, At-SR34b

Description : RNA splicing factor *(SR30/34)


Gene families : OG0011045 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra018550
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_255


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 63
IPR000504 RRM_dom 115 174
No external refs found!