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  5. Bra001813

Bra001813


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG0027127 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra001813
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_117


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003714 transcription corepressor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016229 steroid dehydrogenase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001810 F-box_dom 25 61
No external refs found!