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  5. Bra017778

Bra017778 (PFU2, UBC23)


Aliases : PFU2, UBC23

Description : E2 ubiquitin-conjugating protein *(PHO2)


Gene families : OG0004554 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra017778
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Bra002005 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006664 glycolipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009245 lipid A biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009247 glycolipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030328 prenylcysteine catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030329 prenylcysteine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032940 secretion by cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042219 cellular modified amino acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046467 membrane lipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046493 lipid A metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046903 secretion IEP Brassica rapa GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140352 export from cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901269 lipooligosaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901981 phosphatidylinositol phosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1903509 liposaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 661 774
No external refs found!