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  5. Bra017241

Bra017241 (ABCG34, AtABCG34, PDR6, ATPDR6)


Aliases : ABCG34, AtABCG34, PDR6, ATPDR6

Description : starch branching enzyme. EC_2.4 glycosyltransferase. subfamily ABCG transporter


Gene families : OG0000404 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra017241
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_30


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009678 diphosphate hydrolysis-driven proton transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009916 alternative oxidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015977 carbon fixation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016307 obsolete phosphatidylinositol phosphate kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR013525 ABC2_TM 527 739
IPR013525 ABC2_TM 1177 1389
IPR043926 ABCG_dom 406 503
IPR043926 ABCG_dom 1061 1130
IPR004193 Glyco_hydro_13_N 1652 1734
IPR003439 ABC_transporter-like_ATP-bd 191 373
IPR006047 Glyco_hydro_13_cat_dom 1772 1844
IPR013581 PDR_assoc 749 810
IPR006048 A-amylase/branching_C 2161 2255
IPR003439 ABC_transporter-like_ATP-bd 881 1032
IPR029481 ABC_trans_N 115 166
No external refs found!