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  5. Bra016881

Bra016881 (ATL40)


Aliases : ATL40

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG0006226 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra016881
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_8


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008061 chitin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 142
No external refs found!