Bra016876 (LBD17, ASL15)

Aliases : LBD17, ASL15

Description : AS2/LOB-type transcription factor

Gene families : OG0008486 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra016876
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_164

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	RNA endonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	Interproscan
MF	GO:0004540	RNA nuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004497	monooxygenase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030570	pectate lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071569	protein ufmylation	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004883	LOB	7	105
IPR002156	RNaseH_domain	203	255

External Links

No external refs found!