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  5. Bra016704

Bra016704 (ATUBC1, UBC1)


Aliases : ATUBC1, UBC1

Description : E2 ubiquitin-conjugating enzyme *(UBC1)


Gene families : OG0000752 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000752_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra016704
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Bra016703 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_102101.1 UBC2, ATUBC2 E2 ubiquitin-conjugating enzyme *(UBC1) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006621 protein retention in ER lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032507 maintenance of protein location in cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045185 maintenance of protein location IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046923 ER retention sequence binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071569 protein ufmylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
No external refs found!