Bra016492 (IAA24, MP, ARF5)


Aliases : IAA24, MP, ARF5

Description : ARF-type transcription factor


Gene families : OG0002159 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra016492
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_215


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR010525 ARF_dom 272 355
IPR033389 AUX/IAA_dom 724 816
IPR003340 B3_DNA-bd 146 247
No external refs found!