Bra016300 (AtHB23, HB23)

Aliases : AtHB23, HB23

Description : HD-ZIP I/II-type transcription factor

Gene families : OG0004349 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004349_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra016300
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_81

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0000287	magnesium ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004743	pyruvate kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006096	glycolytic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006887	exocytosis	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030955	potassium ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0031420	alkali metal ion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032940	secretion by cell	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046903	secretion	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0099023	vesicle tethering complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0140352	export from cell	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	77	130
IPR003106	Leu_zip_homeo	132	173

External Links

No external refs found!

Bra016300 (AtHB23, HB23)

Expression Profile

Co-expression Networks

Functional Annotation