Bra016298

Description : peptidyl-prolyl cis-trans isomerase *(CYP23). EC_5.2 cis-trans-isomerase

Gene families : OG0015352 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra016298
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_34

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004140	dephospho-CoA kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006163	purine nucleotide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009117	nucleotide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009165	nucleotide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009259	ribonucleotide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009987	cellular process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015936	coenzyme A metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019637	organophosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019693	ribose phosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0035145	exon-exon junction complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072521	purine-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0090407	organophosphate biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002130	Cyclophilin-type_PPIase_dom	34	189

External Links

No external refs found!

Bra016298

Expression Profile

Co-expression Networks

Functional Annotation