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  5. Bra016240

Bra016240 (ISE2, EMB25, PDE317, 115J-4A)


Aliases : ISE2, EMB25, PDE317, 115J-4A

Description : group-II intron splicing RNA helicase *(ISE2)


Gene families : OG0025615 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra016240
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_3


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006353 DNA-templated transcription termination IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008200 ion channel inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016247 channel regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016248 channel inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017080 sodium channel regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019871 sodium channel inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0099106 ion channel regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140673 transcription elongation-coupled chromatin remodeling IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012961 Ski2/MTR4_C 997 1161
IPR011545 DEAD/DEAH_box_helicase_dom 156 308
No external refs found!