- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : COV1
Description : regulatory protein *(COV1) of vacuolar protein sorting
Gene families : OG0004803 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004803_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra015065 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_17 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008134 | transcription factor binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016311 | dephosphorylation | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016592 | mediator complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0017025 | TBP-class protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0031011 | Ino80 complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0070449 | elongin complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0097346 | INO80-type complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1904949 | ATPase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007462 | COV1-like | 104 | 204 |
| No external refs found! |