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  5. Bra014989

Bra014989 (IRR)


Aliases : IRR

Description : component *(CWC21) of MAC spliceosome-associated complex


Gene families : OG0007969 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra014989
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_17


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008375 acetylglucosaminyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0070449 elongin complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR017868 Filamin/ABP280_repeat-like 80 178
IPR000504 RRM_dom 348 408
No external refs found!