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  5. Bra001479

Bra001479


Description : not classified


Gene families : OG0000883 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra001479
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Bra005732 GCP2, ATGCP2, TUBG2 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra005761 GCP2, ATGCP2, TUBG2 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra015103 GCP2, ATGCP2, TUBG2 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004602 glutathione peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Brassica rapa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!