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  5. Bra014816

Bra014816


Description : not classified


Gene families : OG0030635 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra014816
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_172


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
MF GO:0004565 beta-galactosidase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
CC GO:0009341 beta-galactosidase complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005488 binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032422 purine-rich negative regulatory element binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006104 Glyco_hydro_2_N 88 259
IPR006102 Glyco_hydro_2_Ig-like 261 390
IPR032312 LacZ_4 685 778
IPR004199 B-gal_small/dom_5 809 1085
IPR006103 Glyco_hydro_2_cat 397 677
No external refs found!