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  5. Bra014810

Bra014810 (EXT2, ATHRGP1, HRGP1)


Aliases : EXT2, ATHRGP1, HRGP1

Description : classical extensin


Gene families : OG0002181 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra014810


Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEA Interproscan
BP GO:0009664 plant-type cell wall organization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004564 beta-fructofuranosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005375 copper ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005384 manganese ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006825 copper ion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006873 intracellular monoatomic ion homeostasis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030003 intracellular monoatomic cation homeostasis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030026 intracellular manganese ion homeostasis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035434 copper ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046873 metal ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050801 monoatomic ion homeostasis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055071 manganese ion homeostasis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055080 monoatomic cation homeostasis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055082 intracellular chemical homeostasis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006706 Extensin_dom 369 418
IPR006706 Extensin_dom 469 518
IPR006706 Extensin_dom 419 468
IPR006706 Extensin_dom 265 316
IPR006706 Extensin_dom 239 290
IPR006706 Extensin_dom 549 594
IPR006706 Extensin_dom 291 342
IPR006706 Extensin_dom 394 443
IPR006706 Extensin_dom 213 264
IPR006706 Extensin_dom 187 238
IPR006706 Extensin_dom 444 493
IPR006706 Extensin_dom 84 134
IPR006706 Extensin_dom 343 393
No external refs found!