1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra014430

Bra014430 (SLD1, AtSLD1)


Aliases : SLD1, AtSLD1

Description : delta-8 sphingolipid desaturase


Gene families : OG0004118 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra014430
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_87


Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 143 408
IPR001199 Cyt_B5-like_heme/steroid-bd 11 84
No external refs found!