Bra013794

Description : not classified

Gene families : OG0014029 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra013794
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_221

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009116	nucleoside metabolic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003747	translation release factor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006415	translational termination	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006721	terpenoid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008079	translation termination factor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0009521	photosystem	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0009522	photosystem I	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0009523	photosystem II	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0009538	photosystem I reaction center	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010109	regulation of photosynthesis	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010207	photosystem II assembly	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0010242	oxygen evolving activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016114	terpenoid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016744	transketolase or transaldolase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042549	photosystem II stabilization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1990204	oxidoreductase complex	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000845	Nucleoside_phosphorylase_d	52	337

External Links

No external refs found!

Bra013794

Expression Profile

Co-expression Networks

Functional Annotation