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  5. Bra013461

Bra013461 (JMJ14, PKDM7B)


Aliases : JMJ14, PKDM7B

Description : histone demethylase *(PKDM7)


Gene families : OG0004856 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004856_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra013461
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_21


Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000145 exocyst IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006904 vesicle docking involved in exocytosis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008175 tRNA methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022406 membrane docking IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
CC GO:0035145 exon-exon junction complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048278 vesicle docking IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051640 organelle localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Brassica rapa GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140029 exocytic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140056 organelle localization by membrane tethering IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003349 JmjN 97 130
IPR003347 JmjC_dom 334 450
IPR004198 Znf_C5HC2 557 609
IPR003889 FYrich_C 783 869
IPR003888 FYrich_N 728 776
No external refs found!