Bra013460 (CHS4, LSD1)


Aliases : CHS4, LSD1

Description : regulatory protein *(LSD/LOL) of programmed cell death


Gene families : OG0008023 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra013460
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_17


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000775 chromosome, centromeric region IEP Brassica rapa GO terms from Neighborhoods
BP GO:0002376 immune system process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006955 immune response IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007049 cell cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045087 innate immune response IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 7 31
IPR005735 Znf_LSD1 59 83
IPR005735 Znf_LSD1 100 124
No external refs found!