- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : QRT3, PGF11
Description : polygalacturonase *(QRT3)
Gene families : OG0013948 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra013442 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_160 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008417 | fucosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015297 | antiporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016020 | membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030247 | polysaccharide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032502 | developmental process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042546 | cell wall biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048364 | root development | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048367 | shoot system development | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048731 | system development | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048856 | anatomical structure development | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0099402 | plant organ development | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024535 | Pectate_lyase_SF_prot | 74 | 292 |
| No external refs found! |