Mp8g14060.1 (ATTIP49A, RVB1, RIN1)

Aliases : ATTIP49A, RVB1, RIN1

Description : helicase component *(RVB) of chromatin remodeling complex. helicase component *(RVB)

Gene families : OG0061614 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp8g14060.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_80

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003678	DNA helicase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000469	obsolete cleavage involved in rRNA processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0001522	pseudouridine synthesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0002097	tRNA wobble base modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0002098	tRNA wobble uridine modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004559	alpha-mannosidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006270	DNA replication initiation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006400	tRNA modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006486	protein glycosylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008152	metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0008303	caspase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009451	RNA modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015923	mannosidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016255	attachment of GPI anchor to protein	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032259	methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0033588	elongator holoenzyme complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042254	ribosome biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043412	macromolecule modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043413	macromolecule glycosylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044237	cellular metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0050897	cobalt ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051202	phytochromobilin metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1905369	endopeptidase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR010339	TIP49_P-loop	14	367
IPR041048	RuvB-like_C	373	438

External Links

No external refs found!

Mp8g14060.1 (ATTIP49A, RVB1, RIN1)

Expression Profile

Co-expression Networks

Functional Annotation