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  5. Bra013378

Bra013378 (NCED4, CCD4)


Aliases : NCED4, CCD4

Description : EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase). carotenoid cleavage dioxygenase *(CCD4)


Gene families : OG0014358 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra013378
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_247


Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006081 cellular aldehyde metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Brassica rapa GO terms from Neighborhoods
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 27 497
No external refs found!