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Aliases : ATATE1, DLS1, ATE1
Description : SMARCK component *(BRIP) of SWI/SNF chromatin remodeling complex
Gene families : OG0060816 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp8g03900.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005643 | nuclear pore | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006351 | DNA-templated transcription | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0030515 | snoRNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030684 | preribosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0032040 | small-subunit processome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0034457 | Mpp10 complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097747 | RNA polymerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR015671 | GSCR1_dom | 59 | 167 |
| No external refs found! |