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  5. Mp8g01420.1

Mp8g01420.1 (ATMBD9, MBD9)


Aliases : ATMBD9, MBD9

Description : component *(MBD9) of SWR1 chromatin remodeling complex


Gene families : OG0060622 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp8g01420.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017070 U6 snRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030623 U5 snRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR028941 WHIM2_dom 2288 2435
IPR019787 Znf_PHD-finger 1858 1903
IPR019787 Znf_PHD-finger 171 218
IPR001739 Methyl_CpG_DNA-bd 784 826
IPR018501 DDT_dom 1255 1294
IPR028942 WHIM1_dom 1960 2001
No external refs found!