Mp7g00250.1 (BRR2c)

Aliases : BRR2c

Description : RNA helicase *(Brr2)

Gene families : OG0058934 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp7g00250.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_140

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005516	calmodulin binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006633	fatty acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015994	chlorophyll metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015996	chlorophyll catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0016592	mediator complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019915	lipid storage	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033015	tetrapyrrole catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046149	pigment catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0047746	chlorophyllase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0050080	malonyl-CoA decarboxylase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051235	maintenance of location	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	1115	1280
IPR004179	Sec63-dom	1597	1909
IPR001650	Helicase_C	1393	1478
IPR001650	Helicase_C	497	641
IPR011545	DEAD/DEAH_box_helicase_dom	266	439
IPR004179	Sec63-dom	765	1071

External Links

No external refs found!

Mp7g00250.1 (BRR2c)

Expression Profile

Co-expression Networks

Functional Annotation