Mp6g19660.1 (AtCHC1, CHC1, HAS1)

Aliases : AtCHC1, CHC1, HAS1

Description : heavy chain of clathrin triskelion

Gene families : OG0000457 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000457_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp6g19660.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_102

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_2_124121.1	AtCHC1, CHC1, HAS1	heavy chain of clathrin triskelion	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_12740.1	AtCHC1, CHC1, HAS1	heavy chain of clathrin triskelion	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030118	clathrin coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030125	clathrin vesicle coat	None	Extended
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEA	Interproscan
CC	GO:0030132	clathrin coat of coated pit	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030126	COPI vesicle coat	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR015348	Clathrin_H-chain_linker_core	344	367
IPR000547	Clathrin_H-chain/VPS_repeat	555	692
IPR000547	Clathrin_H-chain/VPS_repeat	850	975
IPR000547	Clathrin_H-chain/VPS_repeat	993	1131
IPR000547	Clathrin_H-chain/VPS_repeat	1289	1431
IPR000547	Clathrin_H-chain/VPS_repeat	701	840
IPR000547	Clathrin_H-chain/VPS_repeat	1144	1281
IPR000547	Clathrin_H-chain/VPS_repeat	1437	1579
IPR022365	Clathrin_H-chain_propeller_rpt	155	197
IPR022365	Clathrin_H-chain_propeller_rpt	20	55

External Links

No external refs found!